Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889358.1_cds_XP_016444042.1_39147
CDS Infomation

[gene=LOC107769347] [db_xref=GeneID:107769347] [protein=putative late blight resistance protein homolog R1B-17] [protein_id=XP_016444042.1] [location=complement(66842..68323)] [gbkey=CDS]
Sequence

ATGGCTGCTTATGTTGCAGTGACTTCTCTAATGGGAACAATAGAGCTTTTGAAATCAAAC
TTGGATATGTGGGACACTCATGTGGAAAGTTTGAGTTTACTCTACGGAGAGTTTGATTCT
CTGCAAGAGCTTCTTGATTATTCTGATGGTGAGCAAATGAAGAATTTGCACACAAAGGTC
AAACACATAGCAAATGAAGCAGAAGACATGCAATCAAACTTGGATCTGTGGGACACAAAT
GCGAAAAGTTTGAATTTACTCCACGAGAAGGTTGATTGTCTGCAAGAGTTTCTTGATCAT
TCTGATGGTGAACAAATGGAGAATTTGTATGAAAAGGTCAAATTCATAGCATATGAAGCA
GAAGACGAAGTTAAACCACAAATAAATGTGGTTATGGACGAACTATGGTACAGACTATAT
CAAGAGGATATTCTCAAGGAAGCCCTCGAGAGTCTTTTTAAGATCTCACAGCGAGCTATA
GAAAATGTTGATTCCCTCAAGGAAGAGCTCATCACGCACATTCAGAATAACAATTTGCAA
GCTGGAAATTCCTCGCATGGTGATTCAAGTTCACTACGATTGCATTCTTCAACCCTTGAG
AACGATATGGTGGGGTACAACATTGAACAATCAAACATGATGAGTCAACTTACTGGAGGC
TCAACTGAACTGGAAGTCATCTCTGTTACAGGTATGGGCGGCATTGGTAAGTCAACTTTT
GCCAAAAGGCTGTTTTCTCATCCCTCAGTTTTGAGCTTTTTTGACATCCGTGGATGGATT
ATCGTGTCTGAGGACTATAGTTATAGAAAGATGCTTTTAGGCCTACTTACAGATGCTAAT
TTTGGGAAAAAAGAAGAGCTTGATAAGAAAAGCGATTCAGATTTAGCCGTTTGCTTGAAA
CAAAGTTTAATGGGTCGAAGGTATTTAATTGTTGTGGATGACATATGGAGCAAGGAAGCT
TGGGATGATATTAGACTGTGTCTTCCAGACGATGGTAAAAGAAGTCGGATACTGTTGACT
ACTCGAGACGTTGAGGTTGCTCAATATGCTAGCTCTCGGAAGGATCCTTTCAGGATGCAT
TTACTTGACTCAGATGACAGTTGGAATTTGTTTTACCAAAAAGCATTTGTAGGAAAAGGT
TTTCCAGTTGAATTCGAGGATGTTGGAAAGGAGGTTGCAAAAAACTGCAACGGATTACCA
CTTATGATTGTTGTGGTTGCCAAGATTCTCTCCAGCAAGAGGACATTGGAAGAGTGGAGA
AAAGTAGCTGAAAGTGTGAGCTCATTAGCAAAAATTGATGCTTATCAACAATGCTCAGGA
ATCCTGGCTTTAAGCTACAATCATCTTCCTTCTTATTTGAAAGGTTGCTTTCTGTATTTT
GGAATTTTTCCAAAAGCTAGCGATATTTCTGTGGAAAAGTTGATTAGATTATGGGTTGTA
GAGGGACTCCTAAAGGTAAAGGTATGGATGGTAAAATCATGA

Peptide Sequence

PEP ID

XP_016444042.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1B-17 [Nicotiana tabacum]
Sequence

MAAYVAVTSLMGTIELLKSNLDMWDTHVESLSLLYGEFDSLQELLDYSDGEQMKNLHTKV
KHIANEAEDMQSNLDLWDTNAKSLNLLHEKVDCLQEFLDHSDGEQMENLYEKVKFIAYEA
EDEVKPQINVVMDELWYRLYQEDILKEALESLFKISQRAIENVDSLKEELITHIQNNNLQ
AGNSSHGDSSSLRLHSSTLENDMVGYNIEQSNMMSQLTGGSTELEVISVTGMGGIGKSTF
AKRLFSHPSVLSFFDIRGWIIVSEDYSYRKMLLGLLTDANFGKKEELDKKSDSDLAVCLK
QSLMGRRYLIVVDDIWSKEAWDDIRLCLPDDGKRSRILLTTRDVEVAQYASSRKDPFRMH
LLDSDDSWNLFYQKAFVGKGFPVEFEDVGKEVAKNCNGLPLMIVVVAKILSSKRTLEEWR
KVAESVSSLAKIDAYQQCSGILALSYNHLPSYLKGCFLYFGIFPKASDISVEKLIRLWVV
EGLLKVKVWMVKS

Transcript Sequence

Gene sequence data has not been registered.